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Slot: sample_id

Link back to the originating sample

URI: basalt_schema:sample_id Alias: sample_id

Applicable Classes

Name Description Modifies Slot
MetagenomicsProduct Abstract base for all metagenomics data products no
ElementalAnalysisProduct Elemental analysis product, typically derived via combustion or similar instr... no
XRayDataProduct Abstract base class for X-ray analytical data products no
MetagenomicsBinningProduct Top-level archive (zip/tar) for binning results stored in MinIO no
ProcessedData A data product generated by a workflow execution no
ProcessingSampleLink The authoritative record of what a SampleProcessing step consumed and produce... no
MetagenomicsAnnotationProduct Top-level archive for functional annotation outputs (zip/tar stored in MinIO) no
RespirationProduct Soil respiration analysis product no
PHProduct Soil pH analysis product, typically derived via pH meter or similar instrumen... no
MSImageProduct one or more image(s) output from a mass spec data processing workflow (eg no
MetagenomicsGenePhylogenyProduct Top-level archive for gene-based phylogeny outputs (zip/tar stored in MinIO) no
MetaproteomicsProduct A tabular data file containing peptide-level, protein-level, or aggregation r... no
XRDPhaseProduct X-ray Diffraction (XRD) mineral phase identification and quantification data no
XASLCFProduct XAS Linear Combination Fitting (LCF) processed result no
RIProduct A compound and its measurements resulting from a no
IonsAnalysisProduct Ions analysis product, typically derived via ICP-OES or similar instrument no
MicrobialBiomassProduct Microbial biomass analysis product, typically derived via chloroform fumigati... no
EnzymeProduct Enzyme activity analysis product, typically derived via colorimetric assay of... no
BulkDensityProduct Bulk density analysis product, typically derived via oven-drying and weighing... no
XCTProduct X-ray computed tomography (XCT) analysis product for pore geometry and flow p... no
UVSpectroscopyProduct A compound and its measurements resulting from a no
MolecularIdentificationProduct a file containing molecular formula identifications that was output from a ma... no
AMP2WellMetadata AMP2-specific per-well metadata no
PhosphorusAnalysisProduct Phosphorus analysis product, typically derived via colorimetric assay of soil... no
TextureProduct Soil texture analysis product, typically derived via hydrometer or similar in... no
GWCMoistureProduct Gravimetric water content (GWC) analysis product, typically derived via oven-... no
HydraulicPropertiesProduct Soil hydraulic parameters derived from HYPROP evaporation-experiment data no
XRFElementalProduct X-ray Fluorescence (XRF) elemental concentration data no
NitrogenAnalysisProduct Nitrogen analysis product, typically derived via colorimetric assay of soil e... no
MassSpectrometryDataProduct Abstract base for all mass spectrometry data products no

Properties

Type and Range

Property Value
Range Sample
Domain Of ProcessedData, ProcessingSampleLink, AMP2WellMetadata, MetagenomicsProduct

Cardinality and Requirements

Property Value

Identifier and Mapping Information

Schema Source

Mappings

Mapping Type Mapped Value
self basalt_schema:sample_id
native basalt_schema:sample_id

LinkML Source

name: sample_id
description: Link back to the originating sample
from_schema: https://emsl-computing.github.io/BASALT-Schema
rank: 1000
alias: sample_id
domain_of:
- ProcessedData
- ProcessingSampleLink
- AMP2WellMetadata
- MetagenomicsProduct
range: Sample
required: false