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Slot: sample_id

Link back to the originating sample

URI: basalt_schema:sample_id Alias: sample_id

Applicable Classes

Name Description Modifies Slot
XRFElementalProduct X-ray Fluorescence (XRF) elemental concentration data no
TomographyProduct Soil tomography analysis product, typically derived via X-ray computed tomogr... no
MetagenomicsProduct Abstract base for all metagenomics data products no
RespirationProduct Soil respiration analysis product no
MSImageProduct one or more image(s) output from a mass spec data processing workflow (eg no
AMP2WellMetadata AMP2-specific per-well metadata no
BulkDensityProduct Bulk density analysis product, typically derived via oven-drying and weighing... no
MetagenomicsAnnotationProduct Top-level archive for functional annotation outputs (zip/tar stored in MinIO) no
IonsAnalysisProduct Ions analysis product, typically derived via ICP-OES or similar instrument no
TextureProduct Soil texture analysis product, typically derived via hydrometer or similar in... no
HydraulicPropertiesProduct Soil hydraulic parameters derived from HYPROP evaporation-experiment data no
EnzymeProduct Enzyme activity analysis product, typically derived via colorimetric assay of... no
PhosphorusAnalysisProduct Phosphorus analysis product, typically derived via colorimetric assay of soil... no
XRDPhaseProduct X-ray Diffraction (XRD) mineral phase identification and quantification data no
MetagenomicsGenePhylogenyProduct Top-level archive for gene-based phylogeny outputs (zip/tar stored in MinIO) no
MetaproteomicsProduct Abstract parent class for processed metaproteomics data no
GWCMoistureProduct Gravimetric water content (GWC) analysis product, typically derived via oven-... no
MassSpectrometryDataProduct Abstract base for all mass spectrometry data products no
MolecularIdentificationProduct a file containing molecular formula identifications that was output from a ma... no
MetagenomicsBinningProduct Top-level archive (zip/tar) for binning results stored in MinIO no
XRayDataProduct Abstract base class for X-ray analytical data products no
NitrogenAnalysisProduct Nitrogen analysis product, typically derived via colorimetric assay of soil e... no
ProcessedData A data product generated by a workflow execution no
MicrobialBiomassProduct Microbial biomass analysis product, typically derived via chloroform fumigati... no
ElementalAnalysisProduct Elemental analysis product, typically derived via combustion or similar instr... no
PHProduct Soil pH analysis product, typically derived via pH meter or similar instrumen... no

Properties

Type and Range

Property Value
Range Sample
Domain Of ProcessedData, AMP2WellMetadata, MetagenomicsProduct

Cardinality and Requirements

Property Value

Identifier and Mapping Information

Schema Source

Mappings

Mapping Type Mapped Value
self basalt_schema:sample_id
native basalt_schema:sample_id

LinkML Source

name: sample_id
description: Link back to the originating sample
from_schema: https://EMSL-Computing.github.io/BASALT-Schema
rank: 1000
alias: sample_id
domain_of:
- ProcessedData
- AMP2WellMetadata
- MetagenomicsProduct
range: Sample
required: false