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Slot: lims_barcode

LIMS barcode identifier

URI: basalt_schema:lims_barcode Alias: lims_barcode

Applicable Classes

Name Description Modifies Slot
MetagenomicsBinningProduct Top-level archive (zip/tar) for binning results stored in MinIO no
UVSpectroscopyProduct A compound and its measurements resulting from a no
MicrobialBiomassProduct Microbial biomass analysis product, typically derived via chloroform fumigati... no
TerraformSample A sample collected from a Terraform experiment no
BulkDensityProduct Bulk density analysis product, typically derived via oven-drying and weighing... no
XCTProduct X-ray computed tomography (XCT) analysis product for pore geometry and flow p... no
ElementalAnalysisProduct Elemental analysis product, typically derived via combustion or similar instr... no
XRayDataProduct Abstract base class for X-ray analytical data products no
ProcessedData A data product generated by a workflow execution no
HydraulicPropertiesProduct Soil hydraulic parameters derived from HYPROP evaporation-experiment data no
XRFElementalProduct X-ray Fluorescence (XRF) elemental concentration data no
CommerciallyPurchasedSample A sample containing commercially purchased material no
CoreSection A section of a core sample (TOP, MID, BTM) no
FieldDeployedTerraformSample A sample collected from a field-deployed Terraform experiment no
IonsAnalysisProduct Ions analysis product, typically derived via ICP-OES or similar instrument no
ProcessedSample A sample that has undergone processing no
MetagenomicsProduct Abstract base for all metagenomics data products no
MixedCultureSample A sample containing multiple cultured organisms no
OtherUndescribedSample A sample that does not fit into any of the other described sample types no
SynthesizedMaterialSample A sample containing synthetically generated material no
XASLCFProduct XAS Linear Combination Fitting (LCF) processed result no
EngineeredStrainSample A sample containing a strain of an organism that has been subjected to geneti... no
Sample A physical sample collected from an environment no
AerosolArmSample An aerosol sample collected by the ARM facility no
WaterSample A sample of water collected from the environment no
RIProduct A compound and its measurements resulting from a no
AMP2UserSample A user-submitted microbial sample for AMP2 workflows no
MetagenomicsAnnotationProduct Top-level archive for functional annotation outputs (zip/tar stored in MinIO) no
MonetSoilSample A soil sample that has been collected according to the MONet soil sampling pr... no
AerosolSample An aerosol sample collected from the environment no
EnzymeProduct Enzyme activity analysis product, typically derived via colorimetric assay of... no
SoilSample A sample of soil collected from the environment no
TextureProduct Soil texture analysis product, typically derived via hydrometer or similar in... no
PHProduct Soil pH analysis product, typically derived via pH meter or similar instrumen... no
PureCultureSample A sample of a culture containing a single organism no
MSImageProduct one or more image(s) output from a mass spec data processing workflow (eg no
PhosphorusAnalysisProduct Phosphorus analysis product, typically derived via colorimetric assay of soil... no
NitrogenAnalysisProduct Nitrogen analysis product, typically derived via colorimetric assay of soil e... no
MassSpectrometryDataProduct Abstract base for all mass spectrometry data products no
MolecularIdentificationProduct a file containing molecular formula identifications that was output from a ma... no
GWCMoistureProduct Gravimetric water content (GWC) analysis product, typically derived via oven-... no
MetaproteomicsProduct A tabular data file containing peptide-level, protein-level, or aggregation r... no
PlantSample A sample containing plant material no
XRDPhaseProduct X-ray Diffraction (XRD) mineral phase identification and quantification data no
MetagenomicsGenePhylogenyProduct Top-level archive for gene-based phylogeny outputs (zip/tar stored in MinIO) no
SedimentSample A sample of sediment collected from the environment no
CultureEnvironmentalSample A sample containing organisms cultured from an environmental sample no
RespirationProduct Soil respiration analysis product no

Properties

Type and Range

Property Value
Range String
Domain Of ProcessedData, Sample

Cardinality and Requirements

Property Value

Identifier and Mapping Information

Schema Source

Mappings

Mapping Type Mapped Value
self basalt_schema:lims_barcode
native basalt_schema:lims_barcode

LinkML Source

name: lims_barcode
description: LIMS barcode identifier
from_schema: https://emsl-computing.github.io/BASALT-Schema
rank: 1000
alias: lims_barcode
domain_of:
- ProcessedData
- Sample
range: string
required: false