Class: FiltrationProcess

The process of segregation of phases; e.g. the separation of suspended solids from a liquid or gas, usually by forcing a carrier gas or liquid through a porous medium.

URI: basalt_schema:FiltrationProcess

 classDiagram
    class FiltrationProcess
    click FiltrationProcess href "../FiltrationProcess/"
      SampleProcessing <|-- FiltrationProcess
        click SampleProcessing href "../SampleProcessing/"

      FiltrationProcess : container_size_ml

      FiltrationProcess : container_type

      FiltrationProcess : description

      FiltrationProcess : filter_material

      FiltrationProcess : filter_pore_size_um

      FiltrationProcess : id

      FiltrationProcess : in_protocol





        FiltrationProcess --> "0..1" SampleProcessingProtocol : in_protocol
        click SampleProcessingProtocol href "../SampleProcessingProtocol/"



      FiltrationProcess : is_pressurized

      FiltrationProcess : name

      FiltrationProcess : separation_method

      FiltrationProcess : volume_ml

Inheritance

SampleProcessing
- FiltrationProcess

Slots

Name	Cardinality and Range	Description	Inheritance
container_size_ml	0..1 Float	The volume of the container an analyte is stored in or an activity takes plac...	direct
container_type	0..1 String	Physical container used for the culture or sample (flask, tube, plate, etc	direct
filter_material	0..1 String	The porous material on which solid particles present in the fluid which flows...	direct
filter_pore_size_um	0..1 Float	The pore size of the filter used in the filtration process, in micrometers	direct
is_pressurized	0..1 Boolean	Whether or not pressure was applied to a thing or process	direct
separation_method	0..1 String	The method used to separate phases during the filtration process (e	direct
volume_ml	0..1 Float	The volume of the sample that was filtered, in milliliters	direct
name	1 String	Human-readable name for the entity or activity	SampleProcessing
description	0..1 String	Human-readable description for the entity or activity	SampleProcessing
in_protocol	0..1 SampleProcessingProtocol	The SampleProcessingProtocol (the recipe) that this step follows	SampleProcessing
id	1 Uuid		SampleProcessing

Identifier and Mapping Information

Schema Source

from schema: https://emsl-computing.github.io/BASALT-Schema

Mappings

Mapping Type	Mapped Value
self	basalt_schema:FiltrationProcess
native	basalt_schema:FiltrationProcess

LinkML Source

Direct

name: FiltrationProcess
description: The process of segregation of phases; e.g. the separation of suspended
  solids from a liquid or gas, usually by forcing a carrier gas or liquid through
  a porous medium.
from_schema: https://emsl-computing.github.io/BASALT-Schema
is_a: SampleProcessing
slots:
- container_size_ml
- container_type
- filter_material
- filter_pore_size_um
- is_pressurized
- separation_method
- volume_ml
slot_usage:
  volume_ml:
    name: volume_ml
    description: The volume of the sample that was filtered, in milliliters.

Induced

name: FiltrationProcess
description: The process of segregation of phases; e.g. the separation of suspended
  solids from a liquid or gas, usually by forcing a carrier gas or liquid through
  a porous medium.
from_schema: https://emsl-computing.github.io/BASALT-Schema
is_a: SampleProcessing
slot_usage:
  volume_ml:
    name: volume_ml
    description: The volume of the sample that was filtered, in milliliters.
attributes:
  container_size_ml:
    name: container_size_ml
    description: The volume of the container an analyte is stored in or an activity
      takes place in, in milliliters.
    from_schema: https://emsl-computing.github.io/BASALT-Schema
    rank: 1000
    alias: container_size_ml
    owner: FiltrationProcess
    domain_of:
    - FiltrationProcess
    range: float
  container_type:
    name: container_type
    description: Physical container used for the culture or sample (flask, tube, plate,
      etc.)
    from_schema: https://emsl-computing.github.io/BASALT-Schema
    rank: 1000
    alias: container_type
    owner: FiltrationProcess
    domain_of:
    - ContainerType
    - CultureGrowth
    - FiltrationProcess
    range: string
  filter_material:
    name: filter_material
    description: The porous material on which solid particles present in the fluid
      which flows through it are largely caught and retained.
    from_schema: https://emsl-computing.github.io/BASALT-Schema
    rank: 1000
    alias: filter_material
    owner: FiltrationProcess
    domain_of:
    - FiltrationProcess
    range: string
  filter_pore_size_um:
    name: filter_pore_size_um
    description: The pore size of the filter used in the filtration process, in micrometers.
    from_schema: https://emsl-computing.github.io/BASALT-Schema
    rank: 1000
    alias: filter_pore_size_um
    owner: FiltrationProcess
    domain_of:
    - FiltrationProcess
    range: float
  is_pressurized:
    name: is_pressurized
    description: Whether or not pressure was applied to a thing or process.
    from_schema: https://emsl-computing.github.io/BASALT-Schema
    rank: 1000
    alias: is_pressurized
    owner: FiltrationProcess
    domain_of:
    - FiltrationProcess
    range: boolean
  separation_method:
    name: separation_method
    description: The method used to separate phases during the filtration process
      (e.g., vacuum filtration, centrifugal filtration, syringe).
    from_schema: https://emsl-computing.github.io/BASALT-Schema
    rank: 1000
    alias: separation_method
    owner: FiltrationProcess
    domain_of:
    - FiltrationProcess
    range: string
  volume_ml:
    name: volume_ml
    description: The volume of the sample that was filtered, in milliliters.
    from_schema: https://emsl-computing.github.io/BASALT-Schema
    rank: 1000
    alias: volume_ml
    owner: FiltrationProcess
    domain_of:
    - MediaPreparation
    - FiltrationProcess
    - SampleProcessingSubstance
    range: float
  name:
    name: name
    description: Human-readable name for the entity or activity.
    from_schema: https://emsl-computing.github.io/BASALT-Schema
    rank: 1000
    alias: name
    owner: FiltrationProcess
    domain_of:
    - Activity
    - Entity
    - DataProduct
    - DataGenerationActivity
    - Instrument
    - OntologyClass
    - ContainerAxis
    - SampleProcessing
    - Configuration
    - CalibrationStandardRun
    - PurchasedMaterial
    - organism
    - Site
    - Sample
    - SamplingActivity
    - SoilSamplingActivity
    - SampleProcessingProtocol
    - SampleProcessingRun
    - Study
    - SoftwareControlledTermValue
    range: string
    required: true
  description:
    name: description
    description: Human-readable description for the entity or activity
    title: description
    from_schema: https://emsl-computing.github.io/BASALT-Schema
    rank: 1000
    alias: description
    owner: FiltrationProcess
    domain_of:
    - Activity
    - Entity
    - DataProduct
    - DataGenerationActivity
    - DataProcessingActivity
    - OntologyClass
    - ContainerType
    - LabDevice
    - SampleProcessing
    - Configuration
    - CalibrationStandardRun
    - PurchasedMaterial
    - organism
    - Site
    - Sample
    - SamplingActivity
    - SoilSamplingActivity
    - SampleProcessingProtocol
    - SampleProcessingRun
    - Study
    - TimestampValue
    - TextValue
    - SoftwareControlledTermValue
    - ControlledTermValue
    - QuantityValue
    range: string
  in_protocol:
    name: in_protocol
    description: 'The SampleProcessingProtocol (the recipe) that this step follows.
      Type-level, not instance-level: every execution of the same SOP points at the
      same record, so this does NOT identify a particular chain. Use in_run for that.
      A chain may mix protocols, so this is recorded per step rather than per run.'
    from_schema: https://emsl-computing.github.io/BASALT-Schema
    rank: 1000
    alias: in_protocol
    owner: FiltrationProcess
    domain_of:
    - SampleProcessing
    range: SampleProcessingProtocol
  id:
    name: id
    from_schema: https://emsl-computing.github.io/BASALT-Schema
    identifier: true
    alias: id
    owner: FiltrationProcess
    domain_of:
    - Activity
    - Entity
    - DataProduct
    - DataGenerationActivity
    - DataProcessingActivity
    - AlternativeIdentifier
    - FunctionalAnnotationIdentifier
    - Instrument
    - OntologyClass
    - ContainerType
    - Custodian
    - InstrumentAlternativeIdentifier
    - LabDevice
    - SampleProcessing
    - ProcessingSampleLink
    - Configuration
    - MobilePhaseSegment
    - MobilePhase
    - MobilePhaseSubstance
    - CalibrationStandardRun
    - PurchasedMaterial
    - MAOMProduct
    - WEOMProduct
    - organism
    - Site
    - Sample
    - AerosolArmSample
    - AerosolSample
    - AMP2UserSample
    - CommerciallyPurchasedSample
    - CultureEnvironmentalSample
    - EngineeredStrainSample
    - FieldDeployedTerraformSample
    - MixedCultureSample
    - MonetSoilSample
    - OtherUndescribedSample
    - PlantSample
    - PureCultureSample
    - SedimentSample
    - SoilSample
    - SynthesizedMaterialSample
    - TerraformSample
    - WaterSample
    - ProcessedSample
    - CoreSection
    - SamplingActivity
    - AerosolArmSamplingActivity
    - AerosolSamplingActivity
    - CommerciallyPurchasedSamplingActivity
    - CultureEnvironmentalSamplingActivity
    - EngineeredStrainSamplingActivity
    - FieldDeployedTerraformSamplingActivity
    - MixedCultureSamplingActivity
    - MonetSoilSamplingActivity
    - OtherUndescribedSamplingActivity
    - PlantSamplingActivity
    - PureCultureSamplingActivity
    - SedimentSamplingActivity
    - SoilSamplingActivity
    - SynthesizedMaterialSamplingActivity
    - TerraformSamplingActivity
    - WaterSamplingActivity
    - SampleProcessingProtocol
    - SampleProcessingRun
    - SubstancesUsedLink
    - SampleProcessingSubstance
    - Study
    - ProjectParticipant
    - TimestampValue
    - TextValue
    - SoftwareControlledTermValue
    - ControlledTermValue
    - PersonValue
    - QuantityValue
    - ConditioningValue
    - zipDownload
    range: uuid
    required: true