Skip to content

Slot: workflow_steps

Per-run workflow parameters. Previously annotated TODO JSONB in schema.

Direction: structured key-value pairs keyed by workflow type.

Schema for allowed keys TBD per workflow type before full implementation.

URI: basalt_schema:workflow_steps Alias: workflow_steps

Applicable Classes

Name Description Modifies Slot
MassSpectrometryDataProcessingActivity Concrete mass spectrometry workflow run no
MetagenomicsDataProcessingActivity Concrete metagenomics workflow run no
DataProcessingActivity Abstract base for any data processing activity (digital to digital) no

Properties

Type and Range

Property Value
Range String
Domain Of DataProcessingActivity

Cardinality and Requirements

Property Value

Identifier and Mapping Information

Schema Source

Mappings

Mapping Type Mapped Value
self basalt_schema:workflow_steps
native basalt_schema:workflow_steps

LinkML Source

name: workflow_steps
description: 'Per-run workflow parameters. Previously annotated TODO JSONB in schema.

  Direction: structured key-value pairs keyed by workflow type.

  Schema for allowed keys TBD per workflow type before full implementation.'
from_schema: https://EMSL-Computing.github.io/BASALT-Schema
rank: 1000
alias: workflow_steps
domain_of:
- DataProcessingActivity
range: string
required: false