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Slot: subspecific genetic lineage (subspecf_gen_lin)

Information about the genetic distinctness of the sequenced organism below the subspecies level, e.g. serovar, serotype, biotype, ecotype, or any relevant genetic typing schemes like Group I plasmid. Supply both the lineage name and the lineage rank separated by a colon, e.g. biovar:abc123

URI: basalt_schema:subspecf_gen_lin Alias: subspecf_gen_lin

Applicable Classes

Name Description Modifies Slot
PureCultureSample A sample of a culture containing a single organism no
MixedCultureSample A sample containing multiple cultured organisms yes
CultureEnvironmentalSample A sample containing organisms cultured from an environmental sample no
OtherUndescribedSample A sample that does not fit into any of the other described sample types yes

Properties

Type and Range

Property Value
Range String
Domain Of CultureEnvironmentalSample, MixedCultureSample, OtherUndescribedSample, PureCultureSample

Cardinality and Requirements

Property Value

TODOs

  • make this inlined/multivalued?

Identifier and Mapping Information

Schema Source

Mappings

Mapping Type Mapped Value
self basalt_schema:subspecf_gen_lin
native basalt_schema:subspecf_gen_lin

LinkML Source

name: subspecf_gen_lin
description: Information about the genetic distinctness of the sequenced organism
  below the subspecies level, e.g. serovar, serotype, biotype, ecotype, or any relevant
  genetic typing schemes like Group I plasmid. Supply both the lineage name and the
  lineage rank separated by a colon, e.g. biovar:abc123
title: subspecific genetic lineage
todos:
- make this inlined/multivalued?
from_schema: https://EMSL-Computing.github.io/BASALT-Schema
rank: 1000
alias: subspecf_gen_lin
domain_of:
- CultureEnvironmentalSample
- MixedCultureSample
- OtherUndescribedSample
- PureCultureSample
range: string