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Slot: protocol_version

Version of the protocol used in the activity, if applicable.

URI: basalt_schema:protocol_version Alias: protocol_version

Applicable Classes

Name Description Modifies Slot
ExperimentalCulture Growth of an experimental culture for downstream analysis no
PreCultureGrowth Growth of a pre-culture to establish viable inoculum before no
EcoplateDataGenerationActivity Ecoplate absorbance measurement at a single timepoint no
EcoplatePlateSetupActivity Ecoplate-specific plate setup no
XRFDataGenerationActivity X-ray Fluorescence (XRF) elemental analysis activity no
PlateDataGenerationActivity Abstract base for plate measurement activities no
AMP2DataGenerationActivity AMP2 plate measurement (OD, fluorescence, flow cytometry) no
PlateSetupActivity Abstract base for 96-well plate setup activities no
XRDDataGenerationActivity X-ray Diffraction (XRD) mineralogical analysis activity no
StockCulturePreparation Preparation of a stock culture from user samples for long-term storage no
NucleotideSequencing A lab activity in which DNA or RNA that was extracted from a sample is sequen... no
CultureGrowth Abstract activity for growing cultures from samples or other cultures no
XRayDataGenerationActivity Abstract base class for X-ray analytical methods including XRF (elemental) no
DataGenerationActivity Abstract base for any data generation activity (physical to digital) no
StrainPurity Purity check of a strain culture no
RespirationDataGenerationActivity Data generation activity for soil respiration analysis no
AMP2PlateSetupActivity AMP2-specific plate setup no
SampleProcessing Abstract base for any sample processing activity (physical to physical) no
MassSpectrometryDataGenerationActivity A record of the mass spectrometry run that generates a raw data product no
MediaPreparation Activity that prepares a batch of growth media no

Properties

Type and Range

Property Value
Range String
Domain Of DataGenerationActivity, SampleProcessing

Cardinality and Requirements

Property Value

Identifier and Mapping Information

Schema Source

Mappings

Mapping Type Mapped Value
self basalt_schema:protocol_version
native basalt_schema:protocol_version

LinkML Source

name: protocol_version
description: Version of the protocol used in the activity, if applicable.
from_schema: https://EMSL-Computing.github.io/BASALT-Schema
rank: 1000
alias: protocol_version
domain_of:
- DataGenerationActivity
- SampleProcessing
range: string