Skip to content

Slot: protocol_url

URL pointing to the protocol used in the activity, if applicable.

URI: basalt_schema:protocol_url Alias: protocol_url

Applicable Classes

Name Description Modifies Slot
StockCulturePreparation Preparation of a stock culture from user samples for long-term storage no
EcoplateDataGenerationActivity Ecoplate absorbance measurement at a single timepoint no
XRDDataGenerationActivity X-ray Diffraction (XRD) mineralogical analysis activity no
AMP2DataGenerationActivity AMP2 plate measurement (OD, fluorescence, flow cytometry) no
NucleotideSequencing A lab activity in which DNA or RNA that was extracted from a sample is sequen... no
CultureGrowth Abstract activity for growing cultures from samples or other cultures no
PlateSetupActivity Abstract base for 96-well plate setup activities no
MediaPreparation Activity that prepares a batch of growth media no
RespirationDataGenerationActivity Data generation activity for soil respiration analysis no
DataGenerationActivity Abstract base for any data generation activity (physical to digital) no
PlateDataGenerationActivity Abstract base for plate measurement activities no
MassSpectrometryDataGenerationActivity A record of the mass spectrometry run that generates a raw data product no
XRayDataGenerationActivity Abstract base class for X-ray analytical methods including XRF (elemental) no
XRFDataGenerationActivity X-ray Fluorescence (XRF) elemental analysis activity no
EcoplatePlateSetupActivity Ecoplate-specific plate setup no
ExperimentalCulture Growth of an experimental culture for downstream analysis no
AMP2PlateSetupActivity AMP2-specific plate setup no
PreCultureGrowth Growth of a pre-culture to establish viable inoculum before no
SampleProcessing Abstract base for any sample processing activity (physical to physical) no
StrainPurity Purity check of a strain culture no

Properties

Type and Range

Property Value
Range String
Domain Of DataGenerationActivity, SampleProcessing

Cardinality and Requirements

Property Value

Identifier and Mapping Information

Schema Source

Mappings

Mapping Type Mapped Value
self basalt_schema:protocol_url
native basalt_schema:protocol_url

LinkML Source

name: protocol_url
description: URL pointing to the protocol used in the activity, if applicable.
from_schema: https://emsl-computing.github.io/BASALT-Schema
rank: 1000
alias: protocol_url
domain_of:
- DataGenerationActivity
- SampleProcessing
range: string