Skip to content

Slot: pathogenicity (pathogenicity)

To what is the entity pathogenic, e.g., humans, animals, plants, or specific tissues.

URI: basalt_schema:pathogenicity Alias: pathogenicity

Applicable Classes

Name Description Modifies Slot
CultureEnvironmentalSample A sample containing organisms cultured from an environmental sample no
OtherUndescribedSample A sample that does not fit into any of the other described sample types no
Organism Reference data representing a biological identity (strain, isolate, no
PureCultureSample A sample of a culture containing a single organism no
MixedCultureSample A sample containing multiple cultured organisms no

Properties

Type and Range

Property Value
Range String
Domain Of Organism, CultureEnvironmentalSample, MixedCultureSample, OtherUndescribedSample, PureCultureSample

Cardinality and Requirements

Property Value

Identifier and Mapping Information

Schema Source

Mappings

Mapping Type Mapped Value
self basalt_schema:pathogenicity
native basalt_schema:pathogenicity

LinkML Source

name: pathogenicity
description: To what is the entity pathogenic, e.g., humans, animals, plants, or specific
  tissues.
title: pathogenicity
from_schema: https://EMSL-Computing.github.io/BASALT-Schema
rank: 1000
alias: pathogenicity
domain_of:
- organism
- CultureEnvironmentalSample
- MixedCultureSample
- OtherUndescribedSample
- PureCultureSample
range: string