Slot: host taxonomy identifier (host_taxid)

NCBI taxon ID. Format with prefix NCBITaxon:####

URI: basalt_schema:host_taxid Alias: host_taxid

Applicable Classes

Name	Description	Modifies Slot
CultureEnvironmentalSample	A sample containing organisms cultured from an environmental sample	yes
OtherUndescribedSample	A sample that does not fit into any of the other described sample types	no
Organism	Reference data representing a biological identity (strain, isolate,	no
FieldDeployedTerraformSample	A sample collected from a field-deployed Terraform experiment	no
PureCultureSample	A sample of a culture containing a single organism	yes
TerraformSample	A sample collected from a Terraform experiment	no
MixedCultureSample	A sample containing multiple cultured organisms	yes

Properties

Type and Range

Property	Value
Range	String
Domain Of	Organism, CultureEnvironmentalSample, FieldDeployedTerraformSample, MixedCultureSample, OtherUndescribedSample, PureCultureSample, TerraformSample

Cardinality and Requirements

Property	Value
### Value Constraints

Property	Value
Regex Pattern	`NCBITaxon:\d+`

Aliases

host_taxonomy_id
host_ncbi_taxon_id
host_taxa_id

Identifier and Mapping Information

Schema Source

from schema: https://EMSL-Computing.github.io/BASALT-Schema

Mappings

Mapping Type	Mapped Value
self	basalt_schema:host_taxid
native	basalt_schema:host_taxid

LinkML Source

name: host_taxid
description: NCBI taxon ID. Format with prefix NCBITaxon:####
title: host taxonomy identifier
from_schema: https://EMSL-Computing.github.io/BASALT-Schema
aliases:
- host_taxonomy_id
- host_ncbi_taxon_id
- host_taxa_id
rank: 1000
alias: host_taxid
domain_of:
- organism
- CultureEnvironmentalSample
- FieldDeployedTerraformSample
- MixedCultureSample
- OtherUndescribedSample
- PureCultureSample
- TerraformSample
range: string
pattern: NCBITaxon:\d+