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Slot: host common name (host_common_name)

Common name for the host organism (e.g., "Pseudomonas putida").

For microbes, this may be identical to organism_name.

URI: basalt_schema:host_common_name Alias: host_common_name

Applicable Classes

Name Description Modifies Slot
CultureEnvironmentalSample A sample containing organisms cultured from an environmental sample yes
OtherUndescribedSample A sample that does not fit into any of the other described sample types no
Organism Reference data representing a biological identity (strain, isolate, no
FieldDeployedTerraformSample A sample collected from a field-deployed Terraform experiment no
PureCultureSample A sample of a culture containing a single organism yes
TerraformSample A sample collected from a Terraform experiment no
MixedCultureSample A sample containing multiple cultured organisms yes

Properties

Type and Range

Property Value
Range String
Domain Of Organism, CultureEnvironmentalSample, FieldDeployedTerraformSample, MixedCultureSample, OtherUndescribedSample, PureCultureSample, TerraformSample

Cardinality and Requirements

Property Value

Aliases

  • common_name

Identifier and Mapping Information

Schema Source

Mappings

Mapping Type Mapped Value
self basalt_schema:host_common_name
native basalt_schema:host_common_name

LinkML Source

name: host_common_name
description: 'Common name for the host organism (e.g., "Pseudomonas putida").

  For microbes, this may be identical to organism_name.'
title: host common name
from_schema: https://EMSL-Computing.github.io/BASALT-Schema
aliases:
- common_name
rank: 1000
alias: host_common_name
domain_of:
- organism
- CultureEnvironmentalSample
- FieldDeployedTerraformSample
- MixedCultureSample
- OtherUndescribedSample
- PureCultureSample
- TerraformSample
range: string