Slot: host common name (host_common_name)
Common name for the host organism (e.g., "Pseudomonas putida").
For microbes, this may be identical to organism_name.
URI: basalt_schema:host_common_name Alias: host_common_name
Applicable Classes
| Name | Description | Modifies Slot |
|---|---|---|
| CultureEnvironmentalSample | A sample containing organisms cultured from an environmental sample | yes |
| OtherUndescribedSample | A sample that does not fit into any of the other described sample types | no |
| Organism | Reference data representing a biological identity (strain, isolate, | no |
| FieldDeployedTerraformSample | A sample collected from a field-deployed Terraform experiment | no |
| PureCultureSample | A sample of a culture containing a single organism | yes |
| TerraformSample | A sample collected from a Terraform experiment | no |
| MixedCultureSample | A sample containing multiple cultured organisms | yes |
Properties
Type and Range
| Property | Value |
|---|---|
| Range | String |
| Domain Of | Organism, CultureEnvironmentalSample, FieldDeployedTerraformSample, MixedCultureSample, OtherUndescribedSample, PureCultureSample, TerraformSample |
Cardinality and Requirements
| Property | Value |
|---|---|
Aliases
- common_name
Identifier and Mapping Information
Schema Source
- from schema: https://EMSL-Computing.github.io/BASALT-Schema
Mappings
| Mapping Type | Mapped Value |
|---|---|
| self | basalt_schema:host_common_name |
| native | basalt_schema:host_common_name |
LinkML Source
name: host_common_name
description: 'Common name for the host organism (e.g., "Pseudomonas putida").
For microbes, this may be identical to organism_name.'
title: host common name
from_schema: https://EMSL-Computing.github.io/BASALT-Schema
aliases:
- common_name
rank: 1000
alias: host_common_name
domain_of:
- organism
- CultureEnvironmentalSample
- FieldDeployedTerraformSample
- MixedCultureSample
- OtherUndescribedSample
- PureCultureSample
- TerraformSample
range: string