Slot: encoded traits (encoded_traits)
Should include key traits like antibiotic resistance or xenobiotic
degradation phenotypes for plasmids, converting genes for phage
URI: basalt_schema:encoded_traits Alias: encoded_traits
Applicable Classes
| Name | Description | Modifies Slot |
|---|---|---|
| CultureEnvironmentalSample | A sample containing organisms cultured from an environmental sample | no |
| OtherUndescribedSample | A sample that does not fit into any of the other described sample types | no |
| Organism | Reference data representing a biological identity (strain, isolate, | no |
| FieldDeployedTerraformSample | A sample collected from a field-deployed Terraform experiment | no |
| PureCultureSample | A sample of a culture containing a single organism | no |
| TerraformSample | A sample collected from a Terraform experiment | no |
| MixedCultureSample | A sample containing multiple cultured organisms | no |
Properties
Type and Range
| Property | Value |
|---|---|
| Range | String |
| Domain Of | Organism, CultureEnvironmentalSample, FieldDeployedTerraformSample, MixedCultureSample, OtherUndescribedSample, PureCultureSample, TerraformSample |
Cardinality and Requirements
| Property | Value |
|---|---|
Identifier and Mapping Information
Schema Source
- from schema: https://EMSL-Computing.github.io/BASALT-Schema
Mappings
| Mapping Type | Mapped Value |
|---|---|
| self | basalt_schema:encoded_traits |
| native | basalt_schema:encoded_traits |
LinkML Source
name: encoded_traits
description: 'Should include key traits like antibiotic resistance or xenobiotic
degradation phenotypes for plasmids, converting genes for phage'
title: encoded traits
from_schema: https://EMSL-Computing.github.io/BASALT-Schema
rank: 1000
alias: encoded_traits
domain_of:
- organism
- CultureEnvironmentalSample
- FieldDeployedTerraformSample
- MixedCultureSample
- OtherUndescribedSample
- PureCultureSample
- TerraformSample
range: string