Slot: analysis_type

The type(s) of analysis planned for this sample.

URI: basalt_schema:analysis_type Alias: analysis_type

Applicable Classes

Name	Description	Modifies Slot
ExperimentalCulture	Growth of an experimental culture for downstream analysis	no
PreCultureGrowth	Growth of a pre-culture to establish viable inoculum before	no
EcoplatePlateSetupActivity	Ecoplate-specific plate setup	no
MixedCultureSample	A sample containing multiple cultured organisms	yes
AerosolSample	An aerosol sample collected from the environment	yes
FieldDeployedTerraformSample	A sample collected from a field-deployed Terraform experiment	yes
PlantSample	A sample containing plant material	yes
PlateSetupActivity	Abstract base for 96-well plate setup activities	no
AerosolArmSample	An aerosol sample collected by the ARM facility	yes
OtherUndescribedSample	A sample that does not fit into any of the other described sample types	yes
StockCulturePreparation	Preparation of a stock culture from user samples for long-term storage	no
TerraformSample	A sample collected from a Terraform experiment	yes
CommerciallyPurchasedSample	A sample containing commercially purchased material	yes
CultureGrowth	Abstract activity for growing cultures from samples or other cultures	no
AMP2UserSample	A user-submitted microbial sample for AMP2 workflows	yes
CultureEnvironmentalSample	A sample containing organisms cultured from an environmental sample	yes
SoilSample	A sample of soil collected from the environment	yes
StrainPurity	Purity check of a strain culture	no
PureCultureSample	A sample of a culture containing a single organism	yes
AMP2PlateSetupActivity	AMP2-specific plate setup	no
SampleProcessing	Abstract base for any sample processing activity (physical to physical)	no
SedimentSample	A sample of sediment collected from the environment	yes
MediaPreparation	Activity that prepares a batch of growth media	no
SynthesizedMaterialSample	A sample containing synthetically generated material	yes
WaterSample	A sample of water collected from the environment	yes

Properties

Type and Range

Property	Value
Range	String
Domain Of	SampleProcessing, AerosolArmSample, AerosolSample, AMP2UserSample, CommerciallyPurchasedSample, CultureEnvironmentalSample, FieldDeployedTerraformSample, MixedCultureSample, OtherUndescribedSample, PlantSample, PureCultureSample, SedimentSample, SoilSample, SynthesizedMaterialSample, TerraformSample, WaterSample

Cardinality and Requirements

Property	Value

Identifier and Mapping Information

Schema Source

• from schema: https://EMSL-Computing.github.io/BASALT-Schema

Mappings

Mapping Type	Mapped Value
self	basalt_schema:analysis_type
native	basalt_schema:analysis_type

LinkML Source

name: analysis_type
description: The type(s) of analysis planned for this sample.
from_schema: https://EMSL-Computing.github.io/BASALT-Schema
rank: 1000
alias: analysis_type
domain_of:
- SampleProcessing
- AerosolArmSample
- AerosolSample
- AMP2UserSample
- CommerciallyPurchasedSample
- CultureEnvironmentalSample
- FieldDeployedTerraformSample
- MixedCultureSample
- OtherUndescribedSample
- PlantSample
- PureCultureSample
- SedimentSample
- SoilSample
- SynthesizedMaterialSample
- TerraformSample
- WaterSample
range: string