Enum: StrainTypeEnum

Types of microbial strains/organisms.

URI: basalt_schema:StrainTypeEnum

Permissible Values

Value	Meaning	Description
bacterial	None	Bacterial strain
fungal	None	Fungal strain
archaeal	None	Archaeal strain
viral	None	Viral isolate
algal	None	Algal strain
protist	None	Protist strain
other	None	Other organism type

Slots

Name	Description
strain_type	Type of strain/organism (bacterial, fungal, archaeal, etc

Identifier and Mapping Information

Schema Source

• from schema: https://EMSL-Computing.github.io/BASALT-Schema

LinkML Source

name: StrainTypeEnum
description: Types of microbial strains/organisms.
from_schema: https://EMSL-Computing.github.io/BASALT-Schema
rank: 1000
permissible_values:
  bacterial:
    text: bacterial
    description: Bacterial strain
    aliases:
    - bacteria
  fungal:
    text: fungal
    description: Fungal strain
    aliases:
    - fungi
    - yeast
  archaeal:
    text: archaeal
    description: Archaeal strain
    aliases:
    - archaea
  viral:
    text: viral
    description: Viral isolate
    aliases:
    - virus
    - phage
    - bacteriophage
  algal:
    text: algal
    description: Algal strain
    aliases:
    - algae
  protist:
    text: protist
    description: Protist strain
  other:
    text: other
    description: Other organism type