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Enum: ModificationMethodEnum

Methods used to introduce genetic modifications into organisms.

URI: basalt_schema:ModificationMethodEnum

Permissible Values

Value Meaning Description Additional Info
electroporation None Introduction of DNA via electrical pulses
conjugation None Transfer of DNA via bacterial conjugation
transformation None Natural or chemical competence-based DNA uptake
transduction None Phage-mediated DNA transfer
crispr None CRISPR-based genome editing
homologous_recombination None Integration via homologous recombination
transposon None Transposon-mediated insertion
other None Other modification method not listed Title: Other
p_element None Title: P-element
phage_transformation None Title: Phage Transformation
piggybac None Title: Piggybac
polyethylene_glycol_mediated None Title: Polyethylene Glycol-mediated
replicon None Title: Replicon
whisker_mediated_transformation None Title: Whisker-mediated Transformation

Slots

Name Description
modification_method Select the method used to insert your construct into the genome of

Identifier and Mapping Information

Schema Source

LinkML Source

name: ModificationMethodEnum
description: Methods used to introduce genetic modifications into organisms.
from_schema: https://EMSL-Computing.github.io/BASALT-Schema
rank: 1000
permissible_values:
  electroporation:
    text: electroporation
    description: Introduction of DNA via electrical pulses
    aliases:
    - Electroporation
  conjugation:
    text: conjugation
    description: Transfer of DNA via bacterial conjugation
    aliases:
    - Conjugation
  transformation:
    text: transformation
    description: Natural or chemical competence-based DNA uptake
    aliases:
    - Transformation
  transduction:
    text: transduction
    description: Phage-mediated DNA transfer
    aliases:
    - Transduction
  crispr:
    text: crispr
    description: CRISPR-based genome editing
    aliases:
    - CRISPR
    - CRISPR-Cas
  homologous_recombination:
    text: homologous_recombination
    description: Integration via homologous recombination
  transposon:
    text: transposon
    description: Transposon-mediated insertion
  other:
    text: other
    description: Other modification method not listed
    title: Other
  p_element:
    text: p_element
    title: P-element
  phage_transformation:
    text: phage_transformation
    title: Phage Transformation
  piggybac:
    text: piggybac
    title: Piggybac
  polyethylene_glycol_mediated:
    text: polyethylene_glycol_mediated
    title: Polyethylene Glycol-mediated
  replicon:
    text: replicon
    title: Replicon
  whisker_mediated_transformation:
    text: whisker_mediated_transformation
    title: Whisker-mediated Transformation