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Slot: subspecific genetic lineage (subspecf_gen_lin)

Information about the genetic distinctness of the sequenced organism below the subspecies level, e.g. serovar, serotype, biotype, ecotype, or any relevant genetic typing schemes like Group I plasmid. Supply both the lineage name and the lineage rank separated by a colon, e.g. biovar:abc123

URI: basalt_schema:subspecf_gen_lin Alias: subspecf_gen_lin

Applicable Classes

Name Description Modifies Slot
PureCultureSample A sample of a culture containing a single organism no
MixedCultureSample A sample containing multiple cultured organisms yes
OtherUndescribedSample A sample that does not fit into any of the other described sample types yes
CultureEnvironmentalSample A sample containing organisms cultured from an environmental sample no

Properties

Type and Range

Property Value
Range String
Domain Of CultureEnvironmentalSample, MixedCultureSample, OtherUndescribedSample, PureCultureSample

Cardinality and Requirements

Property Value

TODOs

  • make this inlined/multivalued?

Identifier and Mapping Information

Schema Source

Mappings

Mapping Type Mapped Value
self basalt_schema:subspecf_gen_lin
native basalt_schema:subspecf_gen_lin

LinkML Source

name: subspecf_gen_lin
description: Information about the genetic distinctness of the sequenced organism
  below the subspecies level, e.g. serovar, serotype, biotype, ecotype, or any relevant
  genetic typing schemes like Group I plasmid. Supply both the lineage name and the
  lineage rank separated by a colon, e.g. biovar:abc123
title: subspecific genetic lineage
todos:
- make this inlined/multivalued?
from_schema: https://emsl-computing.github.io/BASALT-Schema
rank: 1000
alias: subspecf_gen_lin
domain_of:
- CultureEnvironmentalSample
- MixedCultureSample
- OtherUndescribedSample
- PureCultureSample
range: string